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Scientists Decode Finger Millet Genome
Posted by: Prof. Dr. M. Raupp (IP Logged)
Date: September 20, 2017 04:27AM

Finger millet is a major staple food in Africa. It is a good source of
minerals, vitamins, and essential amino acids, and has resistance to drought
and heat.

Finger millet came from the hybridization of two different plant species. A
polyploid, the size and complexity of its genome are thought to confer the
broad environmental tolerance of finger millet, while making genome research
extremely difficult. For the first time, an international team of
researchers from the University of Zurich has managed to decode the complex
genome of finger millet in great detail. It comprises about 2.6 million base
pairs and has more than 62,300 genes - about twice as many as rice.

The researchers found that 57,900 finger millet genes (over 90 percent)
occur in more than two copies. As their DNA sequences are very similar, it
was difficult to correctly allocate the numerous, decoded DNA sections
within the entire genome. The scientists combined a sophisticated
bioinformatics strategy that uses state-of-the-art sequencing methods with a
new technology that can optically map the long, individual DNA molecules in
the genome. "Our newly developed strategy will help sequence the genome of
other polyploid cultivated plants that have not been able to be determined
until now," said Kentaro Shimizu, professor at the UZH Department of
Evolutionary Biology and Environmental Studies.

[www.media.uzh.ch]



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